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6U8U

RNA duplex bound with TNA 3'-3' imidazolium dimer

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.2
Synchrotron siteALS
Beamline8.2.2
Temperature [K]99
Detector technologyCCD
Collection date2018-06-15
DetectorMAR CCD 130 mm
Wavelength(s)1
Spacegroup nameP 3 2 1
Unit cell lengths43.956, 43.956, 84.516
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution50.000 - 2.400
R-factor0.218
Rwork0.216
R-free0.26700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6c8d
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.490
High resolution limit [Å]2.4002.400
Rmerge0.0590.709
Rmeas0.0600.745
Rpim0.0200.228
Number of reflections4009387
<I/σ(I)>37.23.1
Completeness [%]99.9100
Redundancy10.210.6
CC(1/2)1.0000.958
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP729110 % w/v Polyethylene glycol 6,000, 50 mM HEPES; pH 7.0, 200 mM Ammonium acetate, 150 mM Magnesium acetate

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PDB entries from 2024-05-15

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