6TZY
Crystal Structure of a lipin/Pah Phosphatidic Acid Phosphatase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-20 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97934 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 108.017, 135.126, 90.974 |
Unit cell angles | 90.00, 116.19, 90.00 |
Refinement procedure
Resolution | 52.050 - 3.000 |
R-factor | 0.2382 |
Rwork | 0.237 |
R-free | 0.26760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6tzz |
Data reduction software | DIALS |
Data scaling software | Aimless (0.6.2) |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 53.230 | 53.230 | 2.730 |
High resolution limit [Å] | 2.660 | 11.900 | 2.660 |
Rmerge | 0.095 | 0.041 | 0.935 |
Rmeas | 0.103 | 0.045 | 1.009 |
Rpim | 0.039 | 0.017 | 0.376 |
Total number of observations | 235447 | 2628 | 17817 |
Number of reflections | 33662 | 392 | 2481 |
<I/σ(I)> | 10 | 32.9 | 1.8 |
Completeness [%] | 100.0 | 99.1 | 100 |
Redundancy | 7 | 6.7 | 7.2 |
CC(1/2) | 0.999 | 0.998 | 0.396 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 298 | 0.2 M Ca(NO3)2, 15% PEG 8,000, 0.1M MES pH 6 |