6TY6
Variant W229D/F290W-2 of the last common ancestor of Gram-negative bacteria beta-lactamase class A (GNCA4) bound to 5(6)-nitrobenzotriazole (TS-analog)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALBA BEAMLINE XALOC |
| Synchrotron site | ALBA |
| Beamline | XALOC |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-06-14 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.97926 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 78.384, 148.357, 246.008 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 48.480 - 1.800 |
| R-factor | 0.202 |
| Rwork | 0.201 |
| R-free | 0.22830 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5fqk |
| RMSD bond length | 0.019 |
| RMSD bond angle | 1.439 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.480 | 1.860 |
| High resolution limit [Å] | 1.800 | 1.800 |
| Rmerge | 0.089 | 1.440 |
| Rmeas | 0.100 | 1.600 |
| Rpim | 0.045 | 0.687 |
| Number of reflections | 130796 | 13114 |
| <I/σ(I)> | 10.77 | 1.2 |
| Completeness [%] | 98.6 | 99.39 |
| Redundancy | 5.2 | 5.4 |
| CC(1/2) | 0.997 | 0.680 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | COUNTER-DIFFUSION | 4 | 293 | 5.0 M Sodium formate, 100 mM AcNa pH 4-0 |






