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6TY6

Variant W229D/F290W-2 of the last common ancestor of Gram-negative bacteria beta-lactamase class A (GNCA4) bound to 5(6)-nitrobenzotriazole (TS-analog)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2019-06-14
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97926
Spacegroup nameI 2 2 2
Unit cell lengths78.384, 148.357, 246.008
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.480 - 1.800
R-factor0.202
Rwork0.201
R-free0.22830
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5fqk
RMSD bond length0.019
RMSD bond angle1.439
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.15.2_3472)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.4801.860
High resolution limit [Å]1.8001.800
Rmerge0.0891.440
Rmeas0.1001.600
Rpim0.0450.687
Number of reflections13079613114
<I/σ(I)>10.771.2
Completeness [%]98.699.39
Redundancy5.25.4
CC(1/2)0.9970.680
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1COUNTER-DIFFUSION42935.0 M Sodium formate, 100 mM AcNa pH 4-0

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