6TSR
Marasmius oreades agglutinin (MOA) activated by manganese (II) and calcium
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-10-08 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.85051 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 121.569, 121.569, 99.584 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.500 - 1.850 |
Rwork | 0.152 |
R-free | 0.17550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ef2 |
RMSD bond length | 0.014 |
RMSD bond angle | 0.954 |
Data reduction software | XDS (March 15, 2012) |
Data scaling software | XDS (March 15, 2012) |
Phasing software | PHASER (7.0.078) |
Refinement software | REFMAC (7.0.078) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.500 | 1.890 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.061 | 0.492 |
Rmeas | 0.055 | 0.677 |
Rpim | 0.030 | 0.463 |
Number of reflections | 68797 | 1973 |
<I/σ(I)> | 22.8 | |
Completeness [%] | 97.5 | 87.3 |
Redundancy | 3.2 | 2.6 |
CC(1/2) | 0.998 | 0.623 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293.15 | 0.1 M cacodylate/HCl pH 6.5, 16% PEG 8000, 0.15M sodium acetate, 10 mM MnCl2, 10 mM CaCl2, 12.5% DMSO, 5mM DTT |