6TOP
Structure of the PorE C-terminal domain, a protein of T9SS from Porphyromonas gingivalis
Replaces: 6I9OExperimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-18 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.97911 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 208.030, 52.220, 66.560 |
Unit cell angles | 90.00, 108.38, 90.00 |
Refinement procedure
Resolution | 49.000 - 1.550 |
R-factor | 0.1911 |
Rwork | 0.190 |
R-free | 0.21520 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 0.950 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3 (3-OCT-2019)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.350 | 1.590 |
High resolution limit [Å] | 1.550 | 1.550 |
Rmeas | 0.090 | |
Rpim | 0.019 | |
Number of reflections | 96340 | 5637 |
<I/σ(I)> | 19.7 | |
Completeness [%] | 97.6 | 77.6 |
Redundancy | 22 | 14 |
CC(1/2) | 0.999 | 0.850 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.1M sodium acetate 0.1M MES 30% (w/v) PEG2000 |