6TNQ
Crystal structure of the human Arc N-lobe bound to repeat 4 from GKAP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-10 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.976 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.800, 29.370, 71.360 |
Unit cell angles | 90.00, 93.40, 90.00 |
Refinement procedure
Resolution | 100.000 - 1.300 |
Rwork | 0.132 |
R-free | 0.17040 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4x3h |
RMSD bond length | 0.016 |
RMSD bond angle | 1.405 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.16-3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.000 | 1.340 |
High resolution limit [Å] | 1.300 | 1.300 |
Rmeas | 0.032 | 0.179 |
Number of reflections | 46481 | 1546 |
<I/σ(I)> | 24.2 | 4.6 |
Completeness [%] | 89.5 | 40.4 |
Redundancy | 3.4 | 2 |
CC(1/2) | 0.999 | 0.963 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 293 | 1.2 M sodium citrate |