6T6B
Crystal structure of PPARgamma in complex with compound 16 (MF27)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X06DA |
| Synchrotron site | SLS |
| Beamline | X06DA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-08-15 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 1.0000 |
| Spacegroup name | P 41 21 2 |
| Unit cell lengths | 62.542, 62.542, 166.861 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 44.220 - 2.800 |
| R-factor | 0.2341 |
| Rwork | 0.232 |
| R-free | 0.27140 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6avi |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.129 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.7.4) |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 44.220 | 44.220 | 2.950 |
| High resolution limit [Å] | 2.800 | 8.850 | 2.800 |
| Rmerge | 0.088 | 0.022 | 0.993 |
| Rmeas | 0.102 | 0.024 | 1.154 |
| Rpim | 0.037 | 0.009 | 0.428 |
| Number of reflections | 8762 | 329 | 1246 |
| <I/σ(I)> | 15.8 | 1.9 | |
| Completeness [%] | 99.9 | 99.3 | 99.8 |
| Redundancy | 7 | 6 | 7 |
| CC(1/2) | 0.999 | 1.000 | 0.674 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293.15 | 33% PEG 3350, 0.15 M sodium citrate and 0.1 M tris, pH 8.0 |






