6T3T
Structure of the 4-hydroxy-tetrahydrodipicolinate synthase from the thermoacidophilic methanotroph Methylacidiphilum fumariolicum SolV
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-01 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 42 |
Unit cell lengths | 109.060, 109.060, 107.840 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.773 - 2.100 |
R-factor | 0.1836 |
Rwork | 0.181 |
R-free | 0.23180 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2yxg |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.773 | 2.150 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmeas | 0.156 | 0.739 |
Number of reflections | 74317 | 5359 |
<I/σ(I)> | 9.2 | 2.4 |
Completeness [%] | 99.8 | |
Redundancy | 4.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 273 | 0.05 M citric acid, 0.1 M lithium sulfate, 0.05 M sodium phosphate dibasic dihydrate, 19% w/v PEG 1000 |