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6T3S

Structure of Oceanobacillus iheyensis group II intron U-mutant (C289U/C358U/G385A) in the presence of Na+, Mg2+ and 5'-exon

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2013-07-10
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.979500
Spacegroup nameP 21 21 21
Unit cell lengths89.890, 95.240, 227.896
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.890 - 3.280
R-factor0.1983
Rwork0.197
R-free0.22960
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4fax
RMSD bond length0.008
RMSD bond angle1.792
Data reduction softwareXDS (VERSION March 30, 2013)
Data scaling softwareSCALA (3.3.20)
Phasing softwarePHASER (2.5.5)
Refinement softwareREFMAC (5.7.0032)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.89348.8933.460
High resolution limit [Å]3.27910.3703.280
Rmerge0.0330.995
Rmeas0.0890.0411.197
Rpim0.0350.0180.467
Total number of observations201533597428777
Number of reflections3080410794434
<I/σ(I)>15.842.32.5
Completeness [%]99.998.199.8
Redundancy6.55.56.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP730350 mM Na-HEPES pH 7.0, 100 mM magnesium acetate, 150 mM sodium chloride, 4% PEG 8000

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