6SYV
The glucuronoyl esterase OtCE15A S267A variant from Opitutus terrae in complex with D-glucuronate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-06 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.873127 |
Spacegroup name | P 1 |
Unit cell lengths | 43.507, 44.497, 50.367 |
Unit cell angles | 76.43, 66.96, 70.22 |
Refinement procedure
Resolution | 36.220 - 1.120 |
R-factor | 0.1634 |
Rwork | 0.162 |
R-free | 0.18160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6gs0 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.186 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX (1.15.2_3472) |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.220 | 1.160 |
High resolution limit [Å] | 1.120 | 1.120 |
Rmerge | 0.088 | 1.044 |
Rmeas | 0.105 | 1.255 |
Rpim | 0.056 | 0.686 |
Number of reflections | 102117 | 4777 |
<I/σ(I)> | 6.12 | 0.76 |
Completeness [%] | 81.7 | 38.26 |
Redundancy | 3.3 | 3.2 |
CC(1/2) | 0.995 | 0.452 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | Enzyme mixed 50/50 with reservoir solution containing Morpheus screen solution G12: 0.1 M Carboxylic acids (0.2M Sodium formate; 0.2M Ammonium acetate; 0.2M Sodium citrate tribasic dihydrate; 0.2M Sodium potassium tartrate tetrahydrate; 0.2M Sodium oxamate), 0.1 M Buffer System 3 pH 8.5 (Tris; BICINE), and 50 % v/v Precipitant Mix 4 (25% v/v MPD; 25% PEG 1000; 25% w/v PEG 3350). |