6SQU
Crystal structure of human SHIP2 catalytic domain in complex with 1,2,4 Dimer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-09-11 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 44.410, 60.190, 113.960 |
Unit cell angles | 90.00, 92.75, 90.00 |
Refinement procedure
Resolution | 41.350 - 2.270 |
R-factor | 0.2033 |
Rwork | 0.201 |
R-free | 0.25370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4a9c |
RMSD bond length | 0.002 |
RMSD bond angle | 0.517 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.354 | 2.330 |
High resolution limit [Å] | 2.270 | 2.270 |
Rmerge | 0.079 | 1.061 |
Rmeas | 0.094 | 1.253 |
Rpim | 0.050 | 0.661 |
Number of reflections | 27911 | 2067 |
<I/σ(I)> | 9.6 | |
Completeness [%] | 99.7 | 99.9 |
Redundancy | 3.4 | 3.5 |
CC(1/2) | 0.998 | 0.538 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289 | 0.17 M Ammonium sulfate, 25.5 % PEG 4000, 15 % glycerol |