6SPW
Structure of protein kinase CK2 catalytic subunit with the CK2beta-competitive bisubstrate inhibitor ARC3140
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-06-13 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.12713 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 47.503, 85.171, 90.432 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.586 - 1.599 |
R-factor | 0.1658 |
Rwork | 0.165 |
R-free | 0.19600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2pvr |
RMSD bond length | 0.017 |
RMSD bond angle | 1.377 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.590 | 1.656 |
High resolution limit [Å] | 1.599 | 1.599 |
Rmerge | 0.100 | 0.794 |
Number of reflections | 49166 | 4788 |
<I/σ(I)> | 11.56 | 1.98 |
Completeness [%] | 99.8 | 98.84 |
Redundancy | 6.1 | 6.1 |
CC(1/2) | 0.999 | 0.894 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 1 MIKROLITER OF THE CK2ALPHA/ARC3140 MIXTURE (COMPOSITION: 7 MG/ML CK2ALPHA ENZYME, 1 MILLIMOLAR ARC3140, 10 % DIMETHYL SULFOXIDE, 450 MM NACL, 22.5 MM TRIS/HCL, PH 8.5) WAS MIXED WITH 2.5 MIKROLITER RESERVOIR SOLUTION (COMPOSITION: 30 % PEG4000, 0.2 M AMMONIUM ACETATE, 0.1 M SODIUM CITRATE, PH 5.6) FOLLOWED BY VAPOUR DIFFUSION EQUILIBRATION AGAINST MICROLITER OF THE RESERVOIR SOLUTION. |