6SBT
Structure of GluK1 ligand-binding domain (S1S2) in complex with N-(7-(1H-imidazol-1-yl)-2,3-dioxo-6-(trifluoromethyl)-3,4-dihydroquinoxalin-1(2H)-yl benzamide at 2.3 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.07227 |
Spacegroup name | H 3 2 |
Unit cell lengths | 89.275, 89.275, 156.321 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.638 - 2.300 |
R-factor | 0.2073 |
Rwork | 0.205 |
R-free | 0.24850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4qf9 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.574 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.638 | 44.638 | 2.420 |
High resolution limit [Å] | 2.300 | 7.270 | 2.300 |
Rmerge | 0.042 | 0.496 | |
Rmeas | 0.116 | 0.044 | 0.516 |
Rpim | 0.031 | 0.012 | 0.143 |
Number of reflections | 10935 | 387 | 1575 |
<I/σ(I)> | 17.8 | 12.8 | 1.5 |
Completeness [%] | 100.0 | 99.6 | 100 |
Redundancy | 13.3 | 11.9 | 12.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 279 | 20% PEG4000, 0.3M lithiumsulfate, 0.1M phoshat-citate |