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6S75

Crystal structure of Nek7 bound to compound 51

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2019-02-01
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.96861
Spacegroup nameP 1 21 1
Unit cell lengths50.405, 168.971, 84.565
Unit cell angles90.00, 90.03, 90.00
Refinement procedure
Resolution75.620 - 3.300
R-factor0.2629
Rwork0.260
R-free0.31690
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6GT1
RMSD bond length0.003
RMSD bond angle0.552
Data reduction softwareXDS
Data scaling softwareautoPROC
Phasing softwarePHENIX (1.14_3260)
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]75.6203.420
High resolution limit [Å]3.3003.300
Rmerge0.078
Number of reflections212711700
<I/σ(I)>15.28
Completeness [%]96.5
Redundancy6.6
CC(1/2)0.999
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP729320 % w/v Polyethylene glycol 3,350, 150 mM di-Sodium DL-malate; pH 7.0, 3% w/v 1,6-Hexanediol

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