Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6RY6

Crystal structure of Dfg5 from Chaetomium thermophilum in complex with glucosamine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-2
Synchrotron siteESRF
BeamlineID23-2
Temperature [K]100
Detector technologyPIXEL
Collection date2018-09-26
DetectorDECTRIS PILATUS3 2M
Wavelength(s)0.873
Spacegroup nameC 1 2 1
Unit cell lengths83.452, 55.084, 80.506
Unit cell angles90.00, 90.56, 90.00
Refinement procedure
Resolution40.250 - 1.300
R-factor0.114
Rwork0.113
R-free0.12740
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.110
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.13_2998: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.2501.346
High resolution limit [Å]1.3001.300
Rmerge0.0200.140
Rmeas0.035
Number of reflections864338481
<I/σ(I)>15.544.51
Completeness [%]96.394.52
Redundancy1.91.9
CC(1/2)0.9990.946
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6291.15Ammoniumiodide, PEG3350, Calcium acetate, MES, PEG 8000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon