6RHC
Fragment AZ-003 binding at the TAZpS89/14-3-3 sigma interface
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-28 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.033191 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 82.025, 112.307, 62.697 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.830 - 1.200 |
R-factor | 0.182 |
Rwork | 0.181 |
R-free | 0.19674 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3mhr |
RMSD bond length | 0.015 |
RMSD bond angle | 1.912 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.830 | 1.220 |
High resolution limit [Å] | 1.200 | 1.200 |
Rmeas | 0.113 | 0.937 |
Number of reflections | 89802 | 4345 |
<I/σ(I)> | 11.3 | 2.1 |
Completeness [%] | 99.3 | 97.3 |
Redundancy | 12.8 | 12.8 |
CC(1/2) | 0.997 | 0.575 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277.15 | Protein and peptide were mixed at a 1:2 molar stoichiometry with a final protein concentration of 12 mg/mL in crystallization buffer. This was used during hanging-drop crystallization in a 1:1 ratio with 0.1 M HEPES pH 7.5, 0.2 M CaCl2, 5% glycerol, 2 mM BME and 28% PEG400. Crystals were grown within 10 days at 4 C and fragment soaking was performed on crystals of 10 days and older by adding 0.2 uL of a 100 mM stock solution in dimethyl sulfoxide to 2 uL drops containing multiple crystals. |