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6RHC

Fragment AZ-003 binding at the TAZpS89/14-3-3 sigma interface

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, DESY BEAMLINE P11
Synchrotron sitePETRA III, DESY
BeamlineP11
Temperature [K]100
Detector technologyPIXEL
Collection date2018-10-28
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)1.033191
Spacegroup nameC 2 2 21
Unit cell lengths82.025, 112.307, 62.697
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.830 - 1.200
R-factor0.182
Rwork0.181
R-free0.19674
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3mhr
RMSD bond length0.015
RMSD bond angle1.912
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0238)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]41.8301.220
High resolution limit [Å]1.2001.200
Rmeas0.1130.937
Number of reflections898024345
<I/σ(I)>11.32.1
Completeness [%]99.397.3
Redundancy12.812.8
CC(1/2)0.9970.575
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5277.15Protein and peptide were mixed at a 1:2 molar stoichiometry with a final protein concentration of 12 mg/mL in crystallization buffer. This was used during hanging-drop crystallization in a 1:1 ratio with 0.1 M HEPES pH 7.5, 0.2 M CaCl2, 5% glycerol, 2 mM BME and 28% PEG400. Crystals were grown within 10 days at 4 C and fragment soaking was performed on crystals of 10 days and older by adding 0.2 uL of a 100 mM stock solution in dimethyl sulfoxide to 2 uL drops containing multiple crystals.

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PDB entries from 2024-05-15

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