6R61
Major aspartyl peptidase 1 from C. neoformans in complex with Inhibitor LP258
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-11 |
Detector | DECTRIS PILATUS 300K |
Wavelength(s) | 0.9184 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 97.170, 113.390, 91.220 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 73.780 - 1.810 |
R-factor | 0.1864 |
Rwork | 0.185 |
R-free | 0.20230 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 6r5h |
RMSD bond length | 0.011 |
RMSD bond angle | 1.518 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 73.780 | 73.780 | 1.860 |
High resolution limit [Å] | 1.810 | 8.110 | 1.810 |
Rmerge | 0.175 | 0.040 | 1.525 |
Rmeas | 0.202 | 0.047 | 1.769 |
Number of reflections | 44101 | 570 | 2849 |
<I/σ(I)> | 6.66 | 24.42 | 0.88 |
Completeness [%] | 95.8 | 97.8 | 84.5 |
Redundancy | 3.764 | 3.647 | 3.65 |
CC(1/2) | 0.991 | 0.998 | 0.357 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | peptidase (85 mg/ml) in 50 mM sodium acetate, pH=5.0, 100mM NaCl in equal volume with reservoir solution: 100mM lithium sulphate, 45% (v/v) PEG-400, 100 mM sodium acetate pH= 4.5 |