6R5H
Major aspartyl peptidase 1 from C. neoformans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-29 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9184 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 97.422, 112.058, 91.212 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.710 - 1.750 |
R-factor | 0.1814 |
Rwork | 0.180 |
R-free | 0.21000 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.584 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.710 | 48.710 | 1.860 |
High resolution limit [Å] | 1.750 | 5.220 | 1.750 |
Rmerge | 0.134 | 0.044 | 1.204 |
Rmeas | 0.148 | 0.049 | 1.397 |
Total number of observations | 264390 | ||
Number of reflections | 48515 | 2034 | 6339 |
<I/σ(I)> | 10.25 | 34.67 | 0.97 |
Completeness [%] | 95.8 | 99.1 | 78.2 |
Redundancy | 5.45 | 5.551 | 3.677 |
CC(1/2) | 0.997 | 0.998 | 0.396 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | MayI(17-434)-Avi (83 mg/mL) in 50 mM sodium acetate, pH 5.0, 100 mM sodium chloride in equal volume with reservoir solution 200 mM lithium sulfate, 45% (v/v) PEG-400, 100 mM NaOAc pH 4.5 |