6R3P
Crystal structure of human DMC1 ATPase domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9159 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 174.490, 174.490, 179.570 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.011 - 2.050 |
R-factor | 0.1954 |
Rwork | 0.194 |
R-free | 0.21910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4hyy |
RMSD bond length | 0.002 |
RMSD bond angle | 0.478 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.490 | 2.090 |
High resolution limit [Å] | 2.050 | 2.050 |
Rmeas | 0.096 | 2.038 |
Rpim | 0.034 | 0.720 |
Number of reflections | 86315 | 4545 |
<I/σ(I)> | 19.5 | 1.6 |
Completeness [%] | 100.0 | 100 |
Redundancy | 15 | 15.5 |
CC(1/2) | 1.000 | 0.628 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.2 | 293 | 50 mM HEPES-NaOH pH 7.2, 50 mM MgCl2, 500 mM NaCl, 7.5 % PEG3350 |