6Q3Z
Crystal structure of the first bromodomain of human BRD4 in complex with the inhibitor 16k
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-02 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1 |
Spacegroup name | P 1 |
Unit cell lengths | 30.151, 39.511, 55.721 |
Unit cell angles | 84.38, 75.19, 89.96 |
Refinement procedure
Resolution | 33.350 - 2.000 |
R-factor | 0.1739 |
Rwork | 0.172 |
R-free | 0.23143 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2oss |
RMSD bond length | 0.013 |
RMSD bond angle | 1.417 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.350 | 2.050 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.113 | 0.450 |
Number of reflections | 15332 | 1078 |
<I/σ(I)> | 6.7 | 3.4 |
Completeness [%] | 91.9 | 88.4 |
Redundancy | 3.1 | 3 |
CC(1/2) | 0.579 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 25% PEG3350, 0.2M ammonium sulfate, 0.1M bis-tris pH6.5 |