6PPW
Crystal structure of NeuB, an N-acetylneuraminate synthase from Neisseria meningitidis, in complex with magnesium and malate
Replaces: 2ZDRExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X25 |
Synchrotron site | NSLS |
Beamline | X25 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-11-05 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.1 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 58.793, 76.030, 77.370 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.740 - 1.850 |
R-factor | 0.1803 |
Rwork | 0.178 |
R-free | 0.22270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1xuz |
RMSD bond length | 0.006 |
RMSD bond angle | 0.796 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 77.380 | 1.920 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.106 | 0.778 |
Rmeas | 0.117 | 0.882 |
Rpim | 0.054 | 0.409 |
Number of reflections | 30334 | 2959 |
<I/σ(I)> | 2.2 | 2.3 |
Completeness [%] | 99.8 | 99.9 |
Redundancy | 6.9 | 6.9 |
CC(1/2) | 0.996 | 0.641 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 291 | 10mM MgCl2 3% (v/v) MPD 1.7M Malic acid |