6PE9
Crystal Structure of CD40 complexed to FAB516
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 254.840, 224.035, 111.358 |
Unit cell angles | 90.00, 98.00, 90.00 |
Refinement procedure
Resolution | 35.338 - 3.130 |
R-factor | 0.2182 |
Rwork | 0.216 |
R-free | 0.25520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6pe8 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.134 |
Data reduction software | XDS |
Data scaling software | autoPROC |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 167.500 | 3.140 |
High resolution limit [Å] | 3.130 | 3.130 |
Number of reflections | 108254 | 1044 |
<I/σ(I)> | 11.2 | |
Completeness [%] | 99.4 | |
Redundancy | 3.4 | |
CC(1/2) | 0.990 | 0.760 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 296.15 | 1.6M Ammonium Sulfate 2% w/v PEG1000, 100 mM HEPES Sodium Salt pH 7.5 |