6PC2
Crystal structure of Helicobacter pylori PPX/GppA in complex with GNP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-06-10 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 113.016, 94.475, 107.197 |
Unit cell angles | 90.00, 108.53, 90.00 |
Refinement procedure
Resolution | 35.884 - 2.900 |
R-factor | 0.2582 |
Rwork | 0.254 |
R-free | 0.30990 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3hi0 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.495 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX ((dev_3352: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 3.000 |
High resolution limit [Å] | 2.900 | 2.900 |
Rpim | 0.055 | |
Number of reflections | 23947 | 2375 |
<I/σ(I)> | 13.8 | 1 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7.6 | 7.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 20% PEG 3350, 0.2 M Potassium chloride |