6P84
E.coli LpxD in complex with compound 2o
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-06-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 96.584, 96.584, 216.361 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.421 - 1.700 |
R-factor | 0.1707 |
Rwork | 0.169 |
R-free | 0.19610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3eh0 |
Data reduction software | XDS |
Data scaling software | SCALA (0.7.2) |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3211) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 78.020 | 78.020 | 1.730 |
High resolution limit [Å] | 1.700 | 9.310 | 1.700 |
Rmerge | 0.115 | 0.043 | 1.226 |
Rmeas | 0.123 | 0.046 | 1.320 |
Rpim | 0.041 | 0.015 | 0.472 |
Total number of observations | 958641 | 7782 | 33306 |
Number of reflections | 113613 | 916 | 4692 |
<I/σ(I)> | 10.9 | 31.3 | 1.3 |
Completeness [%] | 88.1 | 99.8 | 74 |
Redundancy | 8.4 | 8.5 | 7.1 |
CC(1/2) | 0.998 | 0.999 | 0.533 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | 0.2M Mg formate, 20% PEG 3350 |