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6P7Z

Co-crystal Structure of human SMYD3 with Isoxazole Amides Inhibitors

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2013-10-10
DetectorRAYONIX MX-225
Wavelength(s)1.0000
Spacegroup nameP 21 21 21
Unit cell lengths61.140, 66.179, 107.330
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution31.621 - 1.190
R-factor0.1818
Rwork0.181
R-free0.19810
Structure solution methodMOLECULAR REPLACEMENT
Data reduction softwareDENZO
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.15.2_3472))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.230
High resolution limit [Å]1.1902.5601.190
Rmerge0.0700.0430.460
Total number of observations501496
Number of reflections1387901421713396
<I/σ(I)>9.2
Completeness [%]99.097.596.8
Redundancy3.63.63.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP295Sitting drop, room temp, reservoir is 20%PEG 3350, 0.2M MgOAc protein at 5mg/ml ratio to reservoir is 1:1, seed Soaking: 0.1ul of 200mM compound in DMSO added to drop for 72 hours before harvest

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