6P7Y
Crystal Structure of the Cedar henipavirus Attachment G Glycoprotein globular domain in complex with the receptor ephrin-B2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-06-10 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9192 |
Spacegroup name | P 65 |
Unit cell lengths | 207.021, 207.021, 120.650 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.973 - 2.844 |
R-factor | 0.2076 |
Rwork | 0.207 |
R-free | 0.23990 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.386 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.950 |
High resolution limit [Å] | 2.850 | 6.140 | 2.850 |
Rmerge | 0.112 | 0.047 | |
Rmeas | 0.121 | 0.051 | |
Rpim | 0.053 | 0.019 | 0.628 |
Total number of observations | 505212 | ||
Number of reflections | 69486 | 7096 | 6883 |
<I/σ(I)> | 6.7 | ||
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 7.3 | 7.2 | 6.9 |
CC(1/2) | 0.999 | 0.511 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 298 | 100 mM Tris, pH 8.0, 18% PEG5000 MME |