6P0Z
Crystal structure of N-acetylated KRAS (2-169) bound to GDP and Mg
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-08 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9792 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 65.194, 41.571, 115.410 |
Unit cell angles | 90.00, 104.59, 90.00 |
Refinement procedure
Resolution | 37.230 - 1.011 |
R-factor | 0.1448 |
Rwork | 0.144 |
R-free | 0.16630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6mbu |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 55.844 | 55.844 | 1.070 |
High resolution limit [Å] | 1.010 | 3.030 | 1.010 |
Rmerge | 0.056 | 0.043 | 0.693 |
Rmeas | 0.061 | 0.047 | 0.798 |
Total number of observations | 865327 | ||
Number of reflections | 148845 | 5894 | 20076 |
<I/σ(I)> | 14.84 | 38.98 | 1.45 |
Completeness [%] | 95.3 | 97.9 | 79.8 |
Redundancy | 5.814 | 6.433 | 3.514 |
CC(1/2) | 0.998 | 0.998 | 0.807 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 100mM BS1 pH 6.5, 100mM AminoAcids, 30% PEG500MME_P20K |