6OCA
Ricin A chain bound to VHH antibody V2G10
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-02-01 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 193.962, 50.279, 111.671 |
Unit cell angles | 90.00, 124.68, 90.00 |
Refinement procedure
Resolution | 48.157 - 2.113 |
R-factor | 0.2132 |
Rwork | 0.213 |
R-free | 0.24650 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.622 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX ((1.11.1_2575)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.150 |
High resolution limit [Å] | 2.110 | 5.720 | 2.110 |
Rmerge | 0.115 | 0.049 | 1.504 |
Rmeas | 0.126 | 0.054 | 1.711 |
Rpim | 0.051 | 0.022 | 0.791 |
Total number of observations | 293951 | ||
Number of reflections | 50806 | 2677 | 2247 |
<I/σ(I)> | 4.7 | ||
Completeness [%] | 99.2 | 99.2 | 88.4 |
Redundancy | 5.8 | 5.6 | 4.3 |
CC(1/2) | 0.999 | 0.311 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5 | 295 | 100 mM MES (pH 5.0) and 20% PEG 6,000 |