6OBD
Crystal structure of anti-GLD52 Fab complex with human GLD52 peptide mimetic
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | Cu FINE FOCUS |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2010-08-04 |
| Detector | RIGAKU SATURN 944 |
| Wavelength(s) | 1.5419 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 54.400, 131.200, 133.800 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 30.530 - 2.200 |
| R-factor | 0.2372 |
| Rwork | 0.234 |
| R-free | 0.30680 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.019 |
| RMSD bond angle | 1.848 |
| Data reduction software | HKL-2000 |
| Data scaling software | d*TREK |
| Phasing software | BALBES |
| Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 30.530 | 30.530 | 2.280 |
| High resolution limit [Å] | 2.200 | 4.730 | 2.200 |
| Rmerge | 0.054 | 0.039 | 0.216 |
| Rmeas | 0.063 | 0.045 | 0.293 |
| Total number of observations | 149992 | ||
| Number of reflections | 47509 | 5193 | 4167 |
| <I/σ(I)> | 12.9 | 23.6 | 2.8 |
| Completeness [%] | 95.9 | 99.3 | 84.9 |
| Redundancy | 3.13 | 3.87 | 1.7 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | EVAPORATION | 5.8 | 294 | 0.05M zinc acetate, 17% PEG3350, 0.1M MES pH 5.8 |






