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6OAD

2.05 Angstrom Resolution Crystal Structure of Aminopeptidase B from Escherichia coli str. K-12 substr. MG1655.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2019-02-05
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97872
Spacegroup nameP 1 21 1
Unit cell lengths150.667, 114.761, 161.171
Unit cell angles90.00, 92.02, 90.00
Refinement procedure
Resolution29.880 - 2.050
R-factor0.17398
Rwork0.172
R-free0.21473
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3ij3
RMSD bond length0.006
RMSD bond angle1.473
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareMoRDa
Refinement softwareREFMAC (5.8.0238)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.090
High resolution limit [Å]2.0502.050
Rmerge0.0980.791
Rmeas0.1120.905
Rpim0.0540.437
Number of reflections33877516506
<I/σ(I)>11.91.9
Completeness [%]98.896.4
Redundancy4.14.1
CC(1/2)0.761
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5292Protein: 6.0 mg/ml, 0.01M Tris pH 8.3; Screen: PEGs II (H8), 0.2M Calcium acetate, 0.1M HEPES pH 7.5, 10% (w/v) PEG 8000. Cryo: reservoir + 20% Ethylene glycol.

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