6O67
Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with Mitoglitazone
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 5.0.2 |
| Synchrotron site | ALS |
| Beamline | 5.0.2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-04-08 |
| Detector | DECTRIS PILATUS3 S 6M |
| Wavelength(s) | 0.97741 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 92.930, 60.350, 118.110 |
| Unit cell angles | 90.00, 103.14, 90.00 |
Refinement procedure
| Resolution | 48.300 - 2.520 |
| R-factor | 0.1923 |
| Rwork | 0.187 |
| R-free | 0.24400 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1prg |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.994 |
| Data scaling software | SCALA |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.300 | 2.610 |
| High resolution limit [Å] | 2.520 | 2.520 |
| Rmerge | 0.036 | 0.303 |
| Rmeas | 0.051 | 0.428 |
| Rpim | 0.036 | 0.303 |
| Number of reflections | 21743 | 2124 |
| <I/σ(I)> | 11.79 | 2.54 |
| Completeness [%] | 99.9 | 99.77 |
| Redundancy | 2 | 2 |
| CC(1/2) | 0.999 | 0.814 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.6 | 293 | 0.8M SODIUM CITRATE, 100mM MOPS, pH 7.6 |






