6O41
Crystal structure of the unbound PGZL1 germline Fab fragment (PGZL1_gVmDmJ)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL12-2 |
| Synchrotron site | SSRL |
| Beamline | BL12-2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-07-21 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.97946 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 78.840, 107.490, 131.960 |
| Unit cell angles | 90.00, 94.61, 90.00 |
Refinement procedure
| Resolution | 39.670 - 2.465 |
| R-factor | 0.1714 |
| Rwork | 0.169 |
| R-free | 0.21870 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6o3d |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.820 |
| Data reduction software | XDS (20180126) |
| Data scaling software | XSCALE (20180126) |
| Phasing software | PHASER (2.8.2) |
| Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 39.670 | 2.530 |
| High resolution limit [Å] | 2.465 | 2.465 |
| Rpim | 0.062 | 0.597 |
| Number of reflections | 77485 | 5460 |
| <I/σ(I)> | 9.2 | |
| Completeness [%] | 97.7 | 94 |
| Redundancy | 3.5 | 3.4 |
| CC(1/2) | 0.995 | 0.526 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 20% PEG3350, 0.2 M lithium citrate |






