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6O41

Crystal structure of the unbound PGZL1 germline Fab fragment (PGZL1_gVmDmJ)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2018-07-21
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97946
Spacegroup nameP 1 21 1
Unit cell lengths78.840, 107.490, 131.960
Unit cell angles90.00, 94.61, 90.00
Refinement procedure
Resolution39.670 - 2.465
R-factor0.1714
Rwork0.169
R-free0.21870
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6o3d
RMSD bond length0.005
RMSD bond angle0.820
Data reduction softwareXDS (20180126)
Data scaling softwareXSCALE (20180126)
Phasing softwarePHASER (2.8.2)
Refinement softwarePHENIX ((1.12_2829: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.6702.530
High resolution limit [Å]2.4652.465
Rpim0.0620.597
Number of reflections774855460
<I/σ(I)>9.2
Completeness [%]97.794
Redundancy3.53.4
CC(1/2)0.9950.526
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293.1520% PEG3350, 0.2 M lithium citrate

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