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6O3K

Crystal structure of the unbound Fab fragment of the human HIV-1 neutralizing antibody PGZL1.H4K3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2018-02-16
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97946
Spacegroup nameP 1 21 1
Unit cell lengths52.358, 64.984, 68.005
Unit cell angles90.00, 105.81, 90.00
Refinement procedure
Resolution35.514 - 1.451
R-factor0.1577
Rwork0.156
R-free0.19110
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6o3d
RMSD bond length0.003
RMSD bond angle0.926
Data reduction softwareHKL-2000 (2.3.10)
Data scaling softwareHKL-2000 (2.3.10)
Phasing softwarePHASER (2.7.17)
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]35.5141.480
High resolution limit [Å]1.4501.450
Rpim0.0390.615
Number of reflections740842908
<I/σ(I)>10.11.1
Completeness [%]95.475.4
Redundancy2.81.7
CC(1/2)0.8650.495
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293.15Reservoir: 30% PEG 2000 MME, 0.1 M sodium acetate pH 4.6, 0.2 M ammonium sulfate

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