6NZX
Hadesarchaea YNP_N21 cytochrome b5 domain protein (KUO41884.1)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-05 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.95370 |
Spacegroup name | P 63 |
Unit cell lengths | 72.170, 72.170, 22.810 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 20.000 - 1.900 |
R-factor | 0.22266 |
Rwork | 0.221 |
R-free | 0.26067 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1j03 |
RMSD bond length | 0.010 |
RMSD bond angle | 2.350 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0230) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 23.620 | 1.940 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.179 | 2.100 |
Rmeas | 0.183 | 2.152 |
Rpim | 0.040 | 0.470 |
Number of reflections | 5554 | 363 |
<I/σ(I)> | 15.8 | 1.7 |
Completeness [%] | 100.0 | 100 |
Redundancy | 20.7 | 20.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 296.15 | 0.1M sodium citrate, 2M ammonium sulfate, pH 5.0 |