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6NY5

Crystal structure of the PUM-HD domain of S. pombe Puf1 in complex with RNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyCCD
Collection date2017-03-09
DetectorRIGAKU SATURN 944+
Wavelength(s)1.54
Spacegroup nameI 41 2 2
Unit cell lengths159.677, 159.677, 215.530
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution32.759 - 3.002
R-factor0.2146
Rwork0.211
R-free0.26340
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareAutoSol
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.050
High resolution limit [Å]3.0008.1303.000
Rmerge0.0620.0230.526
Rmeas0.0660.0250.562
Rpim0.0230.0090.197
Total number of observations226676
Number of reflections2812015151376
<I/σ(I)>12.4
Completeness [%]99.998.1100
Redundancy8.17.38.1
CC(1/2)0.9990.960
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.62931.4 M magnesium sulfate, 0.1 M MES

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PDB entries from 2024-05-15

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