6NDL
Crystal structure of Staphylococcus aureus biotin protein ligase in complex with a sulfonamide inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-12-07 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 94.031, 94.031, 130.977 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.657 - 2.000 |
R-factor | 0.1726 |
Rwork | 0.170 |
R-free | 0.22180 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6apw |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.2) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.660 | 46.660 | 2.050 |
High resolution limit [Å] | 2.000 | 8.940 | 2.000 |
Rmerge | 0.129 | 0.036 | 6.729 |
Rmeas | 0.131 | 0.036 | 6.844 |
Rpim | 0.025 | 0.007 | 1.244 |
Total number of observations | 1149362 | 11667 | 86173 |
Number of reflections | 40406 | 537 | 2919 |
<I/σ(I)> | 16.1 | 61.3 | 0.7 |
Completeness [%] | 100.0 | 98.3 | 100 |
Redundancy | 28.4 | 21.7 | 29.5 |
CC(1/2) | 1.000 | 1.000 | 0.204 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 277 | 14% PEG8000, 0.1M Tris pH 8.5, 10% glycerol |