Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6N2S

Ternary complex crystal structure of DNA polymerase Beta with 5-carboxy-dC (5-caC) at the templating position

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyCCD
Collection date2017-09-06
DetectorRIGAKU SATURN 944
Wavelength(s)1.5418
Spacegroup nameP 1 21 1
Unit cell lengths49.066, 79.631, 55.427
Unit cell angles90.00, 106.46, 90.00
Refinement procedure
Resolution25.222 - 2.457
R-factor0.2112
Rwork0.202
R-free0.28960
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2fms
RMSD bond length0.009
RMSD bond angle1.117
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.490
High resolution limit [Å]2.4506.6502.450
Rmerge0.0930.0490.472
Rmeas0.1120.0580.596
Rpim0.0610.0320.358
Total number of observations46211
Number of reflections14763762641
<I/σ(I)>11
Completeness [%]98.697.286.9
Redundancy3.13.22.2
CC(1/2)0.9960.813
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29116-18% PEG 2000 Monomethyl Ether

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon