Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6MZP

Zebrafish betaglycan orphan domain structure from orthorhombic crystal form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2017-10-04
DetectorRAYONIX MX300-HS
Wavelength(s)0.9692
Spacegroup nameP 21 21 21
Unit cell lengths63.520, 107.270, 113.240
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.980 - 2.100
R-factor0.233
Rwork0.232
R-free0.25800
Structure solution methodMIRAS
RMSD bond length0.010
RMSD bond angle1.170
Data reduction softwareMOSFLM (7.2.2)
Data scaling softwareSCALA
Phasing softwareSHARP
Refinement softwareBUSTER (2.10.2)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.9802.160
High resolution limit [Å]2.1002.100
Rmerge0.1262.493
Rmeas0.1372.719
Rpim0.0531.069
Number of reflections458503715
<I/σ(I)>141.3
Completeness [%]99.999.6
Redundancy11.611.2
CC(1/2)0.9980.565
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2989.2% v/v PEG 5K mono methyl ether, 4.6% w/v PEG 20K, 0.1M MES pH 6.2

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon