6MX2
Crystal Structure of ClpP1 from Clostridium difficile 630.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-10 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.12 |
Spacegroup name | P 1 |
Unit cell lengths | 97.328, 97.372, 106.494 |
Unit cell angles | 113.15, 104.56, 103.21 |
Refinement procedure
Resolution | 34.898 - 2.500 |
R-factor | 0.1954 |
Rwork | 0.193 |
R-free | 0.24410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3qwd |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 35.000 | 35.000 | 2.540 |
High resolution limit [Å] | 2.500 | 6.770 | 2.500 |
Rmerge | 0.218 | 0.140 | 0.582 |
Rmeas | 0.248 | 0.159 | 0.662 |
Rpim | 0.118 | 0.074 | 0.311 |
Total number of observations | 460705 | ||
Number of reflections | 109969 | 5569 | 5356 |
<I/σ(I)> | 3.3 | ||
Completeness [%] | 98.3 | 99.5 | 96.6 |
Redundancy | 4.2 | 4.3 | 4.3 |
CC(1/2) | 0.973 | 0.726 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6 | 293 | 2.4 M Sodium Malonate |