6MP8
X-ray crystal structure of VioC bound to Fe(II), D-arginine, and 2-oxoglutarate
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-G |
| Synchrotron site | APS |
| Beamline | 21-ID-G |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2015-02-15 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 0.979 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 79.957, 67.039, 62.130 |
| Unit cell angles | 90.00, 108.15, 90.00 |
Refinement procedure
| Resolution | 59.040 - 1.890 |
| R-factor | 0.222 |
| Rwork | 0.220 |
| R-free | 0.25620 |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.993 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 59.040 | 50.000 | 1.930 |
| High resolution limit [Å] | 1.900 | 5.160 | 1.900 |
| Rmerge | 0.066 | 0.032 | 0.491 |
| Rmeas | 0.078 | 0.038 | 0.577 |
| Rpim | 0.040 | 0.020 | 0.300 |
| Total number of observations | 86472 | ||
| Number of reflections | 23222 | 1196 | 1087 |
| <I/σ(I)> | 8.6 | ||
| Completeness [%] | 93.7 | 93.4 | 85.4 |
| Redundancy | 3.7 | 3.5 | 3.7 |
| CC(1/2) | 0.997 | 0.878 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | EVAPORATION | 8.5 | 293 | 2-oxoglutarate, TRIS-HCl |






