Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6MKO

Crystallographic solvent mapping analysis of glycerol bound to APE1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSEALED TUBE
Source detailsBRUKER IMUS MICROFOCUS
Temperature [K]100
Detector technologyCCD
Collection date2015-08-27
DetectorAPEX II CCD
Wavelength(s)1.5418
Spacegroup nameP 21 21 2
Unit cell lengths46.492, 137.815, 45.193
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution32.217 - 2.090
R-factor0.1786
Rwork0.176
R-free0.22790
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.810
Data reduction softwareSAINT
Data scaling softwareSAINT (2014/2 for Windows)
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]32.2202.190
High resolution limit [Å]2.0902.090
Rmerge0.0770.212
Number of reflections17920
<I/σ(I)>12.633.91
Completeness [%]99.0
Redundancy3.68
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6293100 mM MES, pH 6.0, 200 mM sodium chloride, 18-21% PEG4000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon