6MBQ
Crystal structure of Mg-free wild-type KRAS (2-166) bound to GMPPNP in the state 1 conformation
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-12-05 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.020, 37.910, 99.990 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.448 - 1.350 |
R-factor | 0.1365 |
Rwork | 0.134 |
R-free | 0.17890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3gft |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 35.448 | 35.448 | 1.390 |
High resolution limit [Å] | 1.350 | 6.040 | 1.350 |
Rmerge | 0.048 | 0.026 | 0.257 |
Rmeas | 0.052 | 0.029 | 0.280 |
Total number of observations | 208847 | ||
Number of reflections | 30472 | 397 | 2168 |
<I/σ(I)> | 24.03 | 44.8 | 6.7 |
Completeness [%] | 98.3 | 93 | 95.8 |
Redundancy | 6.854 | 5.733 | 6.295 |
CC(1/2) | 0.999 | 0.999 | 0.958 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 200 mM Ammonium Fluoride, 20% PEG 3350 |