Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6M9U

Structure of the apo-form of 20beta-Hydroxysteroid Dehydrogenase from Bifidobacterium adolescentis strain L2-32

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2017-10-28
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.979
Spacegroup nameI 4 2 2
Unit cell lengths168.371, 168.371, 126.961
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.686 - 2.200
R-factor0.1974
Rwork0.196
R-free0.23110
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3r1i
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.6902.279
High resolution limit [Å]2.2002.200
Rmerge0.140
Rmeas0.151
Rpim0.055
Number of reflections33859733468
<I/σ(I)>9.52
Completeness [%]99.699.72
Redundancy7.3
CC(1/2)0.998
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP27720% v/v 2-propanol, 0.1 M MES monohydrate pH 6.0, 20% w/v Polyethylene glycol monomethyl ether 2,000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon