6M83
Crystal structure of TylM1 S120A bound to SAH and dTDP-phenol
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-07-01 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.9786 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 64.521, 91.267, 93.629 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.995 - 1.369 |
R-factor | 0.1542 |
Rwork | 0.153 |
R-free | 0.18170 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.400 |
High resolution limit [Å] | 1.369 | 3.450 | 1.370 |
Rmerge | 0.049 | 0.032 | 0.423 |
Rmeas | 0.051 | 0.033 | 0.487 |
Rpim | 0.014 | 0.009 | 0.232 |
Number of reflections | 57236 | 3822 | 2806 |
<I/σ(I)> | 19 | ||
Completeness [%] | 97.9 | 99 | 77.3 |
Redundancy | 12.6 | 13.2 | 3.2 |
CC(1/2) | 0.999 | 0.838 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.7 | 298 | Precipitant:27% w/v PEG 3350, 20 mM sodium malonate, 1% v/v 2-propanol, 4.5 mM trimethylamine, 100 mM Hepes pH 7.7 Protein:20 mM sodium malonate pH 7.0, 100 mM sodium chloride, 5 mM AdoMet, 5 mM dTDP-phenol, 18 mg/mL TylM1 S120A Protein:Precipitant 4:2uL |