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6M83

Crystal structure of TylM1 S120A bound to SAH and dTDP-phenol

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]100
Detector technologyCCD
Collection date2014-07-01
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.9786
Spacegroup nameI 2 2 2
Unit cell lengths64.521, 91.267, 93.629
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.995 - 1.369
R-factor0.1542
Rwork0.153
R-free0.18170
Structure solution methodMOLECULAR REPLACEMENT
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.400
High resolution limit [Å]1.3693.4501.370
Rmerge0.0490.0320.423
Rmeas0.0510.0330.487
Rpim0.0140.0090.232
Number of reflections5723638222806
<I/σ(I)>19
Completeness [%]97.99977.3
Redundancy12.613.23.2
CC(1/2)0.9990.838
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.7298Precipitant:27% w/v PEG 3350, 20 mM sodium malonate, 1% v/v 2-propanol, 4.5 mM trimethylamine, 100 mM Hepes pH 7.7 Protein:20 mM sodium malonate pH 7.0, 100 mM sodium chloride, 5 mM AdoMet, 5 mM dTDP-phenol, 18 mg/mL TylM1 S120A Protein:Precipitant 4:2uL

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PDB entries from 2024-05-15

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