6M3I
Crystal structure of HPF1/PARP1 complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-02-16 |
Detector | Nonius Kappa CCD |
Wavelength(s) | 0.97849 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.858, 84.179, 81.731 |
Unit cell angles | 90.00, 107.49, 90.00 |
Refinement procedure
Resolution | 27.390 - 1.980 |
R-factor | 0.1766 |
Rwork | 0.175 |
R-free | 0.20640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6m3g 6bhv |
RMSD bond length | 0.008 |
RMSD bond angle | 0.905 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.030 |
High resolution limit [Å] | 1.980 | 1.980 |
Rpim | 0.053 | 0.385 |
Number of reflections | 44217 | 2414 |
<I/σ(I)> | 14.1 | |
Completeness [%] | 98.3 | |
Redundancy | 3.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 300 | 0.1 M Tris-pH 7.0, 0.2 M magnesium formate dehydrate, 20% w/v PEG 3350. |