6M2K
Uncommon structural features of rabbit MHC class I (RLA-A1) complexed with rabbit haemorrhagic disease virus (RHDV) derived peptide, VP60-10
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL19U1 |
| Synchrotron site | SSRF |
| Beamline | BL19U1 |
| Temperature [K] | 100 |
| Detector technology | CMOS |
| Collection date | 2019-10-15 |
| Detector | SDMS |
| Wavelength(s) | 1.03923 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 49.612, 74.303, 152.192 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 29.970 - 2.590 |
| R-factor | 0.219 |
| Rwork | 0.215 |
| R-free | 0.29380 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5deg |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.018 |
| Data reduction software | MOSFLM |
| Data scaling software | HKL-2000 |
| Phasing software | CNS |
| Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.690 |
| High resolution limit [Å] | 2.590 | 2.590 |
| Rmerge | 0.112 | 0.758 |
| Number of reflections | 18060 | 18060 |
| <I/σ(I)> | 2.78 | |
| Completeness [%] | 99.9 | |
| Redundancy | 11.9 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 0.1 M BIS-TRIS PH 6.5, 20% w/v PEG 5000 |






