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6M2K

Uncommon structural features of rabbit MHC class I (RLA-A1) complexed with rabbit haemorrhagic disease virus (RHDV) derived peptide, VP60-10

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyCMOS
Collection date2019-10-15
DetectorSDMS
Wavelength(s)1.03923
Spacegroup nameP 21 21 21
Unit cell lengths49.612, 74.303, 152.192
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.970 - 2.590
R-factor0.219
Rwork0.215
R-free0.29380
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5deg
RMSD bond length0.008
RMSD bond angle1.018
Data reduction softwareMOSFLM
Data scaling softwareHKL-2000
Phasing softwareCNS
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.690
High resolution limit [Å]2.5902.590
Rmerge0.1120.758
Number of reflections1806018060
<I/σ(I)>2.78
Completeness [%]99.9
Redundancy11.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52910.1 M BIS-TRIS PH 6.5, 20% w/v PEG 5000

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