6LK4
Crystal structure of GMP reductase from Trypanosoma brucei in complex with guanosine 5'-triphosphate
Replaces: 5X8OExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL38B1 |
Synchrotron site | SPring-8 |
Beamline | BL38B1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-07 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 144.107, 144.107, 135.698 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.920 - 2.503 |
R-factor | 0.2077 |
Rwork | 0.206 |
R-free | 0.24430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4dqw |
RMSD bond length | 0.007 |
RMSD bond angle | 0.938 |
Data scaling software | XDS (2017-10-10) |
Phasing software | MOLREP (11.4.06) |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.400 | 2.650 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.065 | 0.921 |
Number of reflections | 24874 | 3926 |
<I/σ(I)> | 43.4 | 3.2 |
Completeness [%] | 99.9 | 99.5 |
Redundancy | 24.4 | 18.1 |
CC(1/2) | 1.000 | 0.906 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.1M HEPES (pH 7.5), 0.8M NaH2PO4, 0.8M KH2PO4 |