6LGI
Bombyx mori GH13 sucrose hydrolase mutant E322Q covalent intermediate complexed with fructose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-23 |
Detector | DECTRIS PILATUS3 S 2M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 65.405, 147.055, 153.544 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.040 - 1.600 |
R-factor | 0.1795 |
Rwork | 0.178 |
R-free | 0.20710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5brq |
RMSD bond length | 0.013 |
RMSD bond angle | 1.780 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.690 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.061 | 0.650 |
Number of reflections | 194405 | 28198 |
<I/σ(I)> | 16.9 | 2.6 |
Completeness [%] | 99.7 | 100 |
Redundancy | 6.4 | 6.6 |
CC(1/2) | 0.999 | 0.833 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 10% PEG 3350, 0.2 M magnesium acetate, 10 mM alpha-glucopyranosyl fluoride, 10 mM fructose |