6L1G
Crystal structure of light-dependent protochlorophyllide oxidoreductase from Synechocystis sp. PCC 6803
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-04 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 156.010, 57.122, 72.856 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.086 - 2.200 |
R-factor | 0.1801 |
Rwork | 0.179 |
R-free | 0.20740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3rd5 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.727 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.280 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.107 | |
Rpim | 0.052 | 0.428 |
Number of reflections | 33980 | 3338 |
<I/σ(I)> | 15.2 | |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 4.8 | 4.9 |
CC(1/2) | 0.990 | 0.686 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.5 | 289 | 0.1 M HEPES, pH 7.5, 1.5 M lithium sulfate |