6KNI
Crystal structure of SbnH in complex with the cofactor PLP, a PLP-dependent decarboxylase in Staphyloferrin B biothesynthesis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-12-28 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.979 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 176.608, 80.311, 111.826 |
Unit cell angles | 90.00, 102.15, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.970 |
Rwork | 0.205 |
R-free | 0.23672 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2j66 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MERLOT |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 109.320 | 2.080 |
High resolution limit [Å] | 1.970 | 1.970 |
Rmerge | 0.097 | 0.443 |
Number of reflections | 105438 | 15457 |
<I/σ(I)> | 9.1 | |
Completeness [%] | 97.7 | |
Redundancy | 3.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 290 | 0.2 M NaAC, 50 mM Bis-Tris pH 6.0, 23% PEG 3,350 |